CDS

Accession Number TCMCG016C06228
gbkey CDS
Protein Id OMO92940.1
Location join(15102..15289,15751..15848,15977..16010,16136..16305,16470..16653,17175..17355,17712..>17815)
Organism Corchorus capsularis
locus_tag CCACVL1_06721

Protein

Length 319aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01008135.1
Definition Pre-mRNA cleavage complex II Clp1, partial [Corchorus capsularis]
Locus_tag CCACVL1_06721

EGGNOG-MAPPER Annotation

COG_category U
Description Polynucleotide 5'-hydroxyl-kinase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K06947        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000448        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000463        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0019205        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051731        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTCTATGTTGGAAAGTGAAAGTTCAACGGGAAGCATATACATATCAGACGACTGGTCGGCGGCTGCAAACTCCATAGCCTATGGTTCAGTAACTTCGCCACCTCCACTTGCTTTCATCTGTGGCCCCAAAAACTCTGGCAAAACCACTTTCTCCCGTCACCTCCTCAATGTTCTTCTTCAAAGGTACCCTAAAGTAGCCTATTTGGACACAGATGTTGGGCAGCCAGAGTTCACCACTCCAGGTTTCCTGTCCCTTACAGTTGTTGACAAACTGACCCCAGATTTGGCAATTCCATGCTTGAAGACACCTGATAGGTGTCTTTTCTTTGGTGATGTTTCTTCGAAAAGGGACCCATCCACATACTTGAAATATATATTCACCTTATGCGATTACTATCGAAAAGAGTACTGCATGTTTGATAAGAGTGAAAGCCCTGGTAGGACTGAATTGCCCCTTGTTGTCAATACACCTGGTTGGGTGAAAGGTATTGGTTACGAGATATTGGTGGATATGCTGAAATATATTTCTCCTACTCATGTGGTTAAGATAAACATATCTGCTGAGAGTAAGAATCTGCCTAGGGGGGCATTTTGGCTGGATGGTGATTATGATGGGATGGTTAATATTATGGAGATCAAATCAGCTCGCCAGGACTCCTTTAACAGATCAGTGCTAGTACAGAAGGATGCTCGGCTTCTGCGGGATTTGCGGATAATGGCTTATTTCAGGCAGTGCTTTCCTAGCTACCAGCCTATTACTACAATTAAAGAACTTGCATATGTGCTGGCATCTCATTCTCCTTATGAAGTTCCATTATCAAGTATCAAAATTAGGCATCTCCATTGCCAGGTCCCAAGCACTGAAACTTTCTACAGTTTGAATGCAACCATTGTTGGCTTGGCTGTCAGTTCAGAGGAGTCTGAAGGCTTCCCCTGGTGTGTTGGTCTTGGTAG
Protein:  
MASMLESESSTGSIYISDDWSAAANSIAYGSVTSPPPLAFICGPKNSGKTTFSRHLLNVLLQRYPKVAYLDTDVGQPEFTTPGFLSLTVVDKLTPDLAIPCLKTPDRCLFFGDVSSKRDPSTYLKYIFTLCDYYRKEYCMFDKSESPGRTELPLVVNTPGWVKGIGYEILVDMLKYISPTHVVKINISAESKNLPRGAFWLDGDYDGMVNIMEIKSARQDSFNRSVLVQKDARLLRDLRIMAYFRQCFPSYQPITTIKELAYVLASHSPYEVPLSSIKIRHLHCQVPSTETFYSLNATIVGLAVSSEESEGFPWCVGLG